The Prayers of Paul: How the Apostle Prayed for the Churches

What he asked God for, what he left off the list, and how to borrow his words for your own congregation

10 min read
30 Sep 2026
Emily Carter-Smith

Sit in on almost any midweek prayer meeting and you can predict the shape of the requests before anyone opens their mouth. Someone's mother is having a hip replaced. A young couple is waiting on a job offer. A man in the back asks prayer for his brother, who is drinking again. There is nothing wrong with any of it. These are real needs brought by real people who believe God listens. But then you open Paul's letters and read what he prayed for the churches he loved, and something in the room shifts. He is writing from a cell. Their needs were at least as urgent as ours. And he asks God for things almost none of us would think to ask.

Paul's prayers are scattered through his letters like windows cut into a wall. He rarely explains his theology of prayer. He simply prays, out loud, on paper, in front of everyone, and in doing so he shows us what he believed a church most desperately needed. Four of those windows are especially wide: Ephesians 1, Ephesians 3, Philippians 1, and Colossians 1. Read them together and a pattern emerges that can quietly reorganize your whole prayer life.

A prisoner praying for other people's eyes

Ephesians was written by a man under guard. He calls himself "a prisoner for Christ Jesus" (Ephesians 3:1), and later asks the church to pray that he might open his mouth boldly, "for which I am an ambassador in chains" (6:20). So we know what a self-focused prayer would have looked like. Release. Safety. A fair hearing. Enough food. Instead, having heard of their faith and love, he says, "I do not cease to give thanks for you, remembering you in my prayers" (1:16), and then he asks God to give them "the Spirit of wisdom and of Revelation in the knowledge of him."

What follows is one of the strangest and most beautiful petitions in Scripture: "having the eyes of your hearts enlightened, that you may know what is the hope to which he has called you, what are the riches of his glorious inheritance in the saints, and what is the immeasurable greatness of his power toward us who believe" (Ephesians 1:18-19). Notice that he does not ask God to give them hope, inheritance, or power. He asks God to let them see what they already have. Paul's deepest concern for the church was not that they lacked something, but that they could not see what was already theirs.

That assumption runs through all four prayers. The Ephesians were rich and did not know it. The Colossians were secure and kept reaching for extra rituals to feel safe. The Philippians were generous and needed that love sharpened rather than manufactured. Paul prays like a man handing people a lamp in a room already full of furniture.

Strength for the part of us nobody sees

The second prayer, in Ephesians 3, begins with Paul on his knees before the Father "from whom every family in heaven and on earth is named" (3:15). He asks that God would grant them "to be strengthened with power through his Spirit in your inner being, so that Christ may dwell in your hearts through faith" (3:16-17). That phrase, the inner being, is worth sitting with. Paul is not praying for stamina to get through a hard week. He is praying that the hidden center of a person, the place where courage and love and conviction either hold or crumble, would be reinforced by the power of God himself.

Then he asks for something almost self-contradicting: that they would have "strength to comprehend with all the saints what is the breadth and length and height and depth, and to know the love of Christ that surpasses knowledge" (3:18-19). Know what cannot be known. Measure what has no edges. Paul is not confused. He understands that the love of Christ is not a doctrine to be mastered but an ocean to be entered, and that entering it takes strength, because most of us are more comfortable being useful to God than being loved by him.

And he does not pray this for individuals in isolation. It is "with all the saints." You cannot get your arms around the love of Christ alone. You learn its length from the woman who kept forgiving, its depth from the man who came back after his worst year, its breadth from believers whose culture and politics and music are nothing like yours. Paul prays for comprehension that only happens in company.

Love that can tell the difference

Philippi was Paul's warmest congregation, and his prayer for them starts where all four of his prayers start: with thanks. "I thank my God in all my remembrance of you, always in every prayer of mine for you all making my prayer with joy, because of your partnership in the gospel from the first day until now" (Philippians 1:3-5). Then comes the confidence that steadies the whole letter: "he who began a good work in you will bring it to completion at the day of Jesus Christ" (1:6).

The request itself is finely tuned. "And it is my prayer that your love may abound more and more, with knowledge and all discernment, so that you may approve what is excellent, and so be pure and blameless for the day of Christ" (1:9-10). He does not simply ask that they love more. He asks that their love grow in accuracy. Anyone who has been in a church for a decade knows the difference between affection and wisdom. Warmth without discernment enables the wrong people and avoids the hard conversations. Discernment without warmth turns a congregation into a courtroom. Paul wants both growing together, so that a church becomes the kind of place where love knows what to do next.

A worthy walk in Colossae

Colossians 1 is the most comprehensive of the four. Paul asks that they "be filled with the knowledge of his will in all spiritual wisdom and understanding" (1:9), and then, tellingly, gives the purpose: "so as to walk in a manner worthy of the Lord, fully pleasing to him, bearing fruit in every good work and increasing in the knowledge of God" (1:10). Knowledge leads to walking. Walking produces fruit. Fruit leads back to deeper knowledge. It is a spiral, not a ladder, and Paul asks God to keep it turning.

Then the request that most people misread: "being strengthened with all power, according to his glorious might" (1:11). We hear that and imagine miracles or mountain-moving boldness. Paul finishes the sentence differently: "for all endurance and patience with joy." All that power, for the sake of putting up with things cheerfully. In Paul's theology, the clearest evidence of divine strength is a Christian who has been treated badly for a long time and is still kind. He ends by asking that they give thanks to the Father, "who has qualified you to share in the inheritance of the saints in light" (1:12). Not who will qualify you. Who has.

What Paul did not ask for

Here is where the comparison gets uncomfortable. In none of these four prayers does Paul ask God to change anyone's circumstances. He does not pray for the Ephesians to be spared persecution, for the Philippians' finances (though they were poor and generous), for the Colossians' false teachers to be run out of town, or for anyone's health. He does not pray for the church to grow numerically or for the culture around them to improve.

Before we draw the wrong conclusion, it should be said plainly that Paul was not against practical requests. He asked the Romans to "strive together with me in your prayers to God on my behalf, that I may be delivered from the unbelievers in Judea" (Romans 15:30-31). He asked the Ephesians to pray for words and boldness (6:19). He told the Corinthians that God "delivered us from such a deadly peril," partly through their prayers (2 Corinthians 1:10-11). He prayed three times about his own thorn. Jesus taught us to ask for daily bread. Pray for the hip replacement. Pray for the job.

But notice the proportion. Paul's great prayers for congregations concern what happens inside people, because he believed that is where the real crisis and the real victory lie. Circumstances can be endured. A blind heart cannot endure anything. If God answered every circumstantial prayer on an average church prayer list and nothing else, the congregation would be comfortable and no closer to knowing him. Paul aimed higher. He asked God for the things that no change in circumstances could ever supply.

Prayers with an ending in view

One more thread ties these prayers together: Paul prays with the last day in mind. Philippians looks toward "the day of Jesus Christ." Ephesians speaks of an inheritance and a calling. Colossians has believers already qualified for a share "in the inheritance of the saints in light." Paul is not praying for people to have a good year. He is praying for people to arrive.

That long view changes the emotional temperature of intercession. When you are praying only about this month's problems, unanswered prayer feels like failure. When you are praying that a friend would arrive at the day of Christ pure and full of fruit, a hard season is not evidence that God has stopped working. It may be the very tool. Paul's confidence in Philippians 1:6 is not naive optimism about the church's behavior (he spends chapter 4 asking two women to stop fighting). It is confidence in the workman.

Borrowing his words for your own church

The most practical thing you can do with these four passages is the simplest: pray them, by name, for real people. Open Ephesians 1 on a Sunday morning before you leave the house and ask God to enlighten the eyes of the hearts of the people you are about to sit beside. Pray Colossians 1:9-12 for your pastor, who probably has more knowledge of God's will than opportunity to walk in it. Pray Philippians 1:9 for the small group that loves each other warmly and has never once told each other the truth.

Try it for a month and watch what it does to you. You will find it hard to stay annoyed with someone you have just asked God to fill with all the fullness of God. You will notice that your requests stop ending at relief and start reaching for maturity. You will also find yourself praying more honestly for your own household, because these prayers assume that the people we love most need something deeper than comfort, and so do we.

And you will notice where Paul goes when his praying runs out of words. He does not trail off. He bursts into praise: "Now to him who is able to do far more abundantly than all that we ask or think, according to the power at work within us, to him be glory in the church and in Christ Jesus throughout all generations, forever and ever. Amen" (Ephesians 3:20-21). That is what a man in chains said about God's capacity. Far more than we ask. Far more than we can even think to ask. Which is, in the end, the best reason to keep asking.

paul prayers ephesians colossians philippians church intercession
Emily Carter-Smith

Emily Carter-Smith

Blogger sharing faith and family reflections from Charlotte. Learn more »

Emily writes about Doctrine, Bible and Christian living.

View More Articles by Emily